Automated Air-Liquid Interface Cell Culture Analysis Using Deep Optical Flow

Autogenerated Report: RAINBOW image series analysis results

Author: Alphons G

Website: https://github.com/AlphonsGwatimba/Automated-Air-Liquid-Interface-Cell-Culture-Analysis-Using-Deep-Optical-Flow

Source directory

Image Series Type

RAINBOW Analysis Timestamp

Image Series Metadata

Magnitude Statistics

Direction Statistics

Raw Image Series (left) and RAINBOW Optical Flow Visualisation (Right)

a) The direction of motion at any position within RAINBOW generated optical flow images is measured clockwise from the initial horizontal position of a unit circle (left) and is shown using hue values (right).

b) The magnitude of motion at any position within RAINBOW generated optical flow images is shown using saturation values. For instance, high saturation corresponds to high magnitude of motion and low saturation corresponds to low magnitude of motion. For instance, high saturation (100%) corresponds to high magnitude of motion and low saturation (25%) corresponds to low magnitude of motion.

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Magnitude Heatmaps Across Image Series

Visualization of motion magnitiude using heatmap with hot colour mapping.

Quiver Plots Across Image Series

Visualisation of optical flow using quiver plots containing vector arrows.